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Periodicals

Biological Consequences of Ecosystem Fragmentation: A Review

Abstract. Abstract Research on fragmented ecosystems has focused mostly on the biogeograpbic consequences of the creation of habitat “islands” of different sizes and has provided little of practical value to managers. However, ecosystem fragmentation causes large changes in the physical environment as well as biogeograpbic changes. Fragmentation generally results in a landscape that consists of remnant areas of native vegetation surrounded by a matrix of agricultural or other developed land. As a result fluxes of radiation, momentum (La, wind), water, and nutrients across the landscape are altered significantly. These in turn can have important influences on biota within remnant areas, especially at or near the edge between the remnant and the surrounding matrix. The isolation of remnant areas by clearing also has important consequences for the biota. These consequences vary with the time since isolation distance from other remnants, and degree of connectivity with other remnants. The influences of physical and biogeographic changes are modified by the size, shape, and position in the landscape of individual remnant, with larger remnants being less adversely affected by the fragmentation process. The Dynamics of remnant areas are predominantly driven by factors arising in the surrounding landscape. Management of, and research on, fragmented ecosystems should be directed at understanding and controlling these external influences as much as at the biota of the remnants themselves. There is a strong need to develop an integrated approach to landscape management that places conservation reserves in the context of the overall landscape

Agriculture1991Wiley
Periodicals

ReCiPe2016: a harmonised life cycle impact assessment method at midpoint and endpoint level

Life cycle impact assessment (LCIA) translates emissions and resource extractions into a limited number of environmental impact scores by means of so-called characterisation factors. There are two mainstream ways to derive characterisation factors, i.e. at midpoint level and at endpoint level. To further progress LCIA method development, we updated the ReCiPe2008 method to its version of 2016. This paper provides an overview of the key elements of the ReCiPe2016 method. We implemented human health, ecosystem quality and resource scarcity as three areas of protection. Endpoint characterisation factors, directly related to the areas of protection, were derived from midpoint characterisation factors with a constant mid-to-endpoint factor per impact category. We included 17 midpoint impact categories. The update of ReCiPe provides characterisation factors that are representative for the global scale instead of the European scale, while maintaining the possibility for a number of impact categories to implement characterisation factors at a country and continental scale. We also expanded the number of environmental interventions and added impacts of water use on human health, impacts of water use and climate change on freshwater ecosystems and impacts of water use and tropospheric ozone formation on terrestrial ecosystems as novel damage pathways. Although significant effort has been put into the update of ReCiPe, there is still major improvement potential in the way impact pathways are modelled. Further improvements relate to a regionalisation of more impact categories, moving from local to global species extinction and adding more impact pathways. Life cycle impact assessment is a fast evolving field of research. ReCiPe2016 provides a state-of-the-art method to convert life cycle inventories to a limited number of life cycle impact scores on midpoint and endpoint level.

Agriculture2016Springer Science+Business Media
Periodicals

Epidemiology of COVID-19 Among Children in China

OBJECTIVE: To identify the epidemiological characteristics and transmission patterns of pediatric patients with the 2019 novel coronavirus disease (COVID-19) in China. METHODS: Nationwide case series of 2135 pediatric patients with COVID-19 reported to the Chinese Center for Disease Control and Prevention from January 16, 2020, to February 8, 2020, were included. The epidemic curves were constructed by key dates of disease onset and case diagnosis. Onset-to-diagnosis curves were constructed by fitting a log-normal distribution to data on both onset and diagnosis dates. RESULTS: There were 728 (34.1%) laboratory-confirmed cases and 1407 (65.9%) suspected cases. The median age of all patients was 7 years (interquartile range: 2-13 years), and 1208 case patients (56.6%) were boys. More than 90% of all patients had asymptomatic, mild, or moderate cases. The median time from illness onset to diagnoses was 2 days (range: 0-42 days). There was a rapid increase of disease at the early stage of the epidemic, and then there was a gradual and steady decrease. The disease rapidly spread from Hubei province to surrounding provinces over time. More children were infected in Hubei province than any other province. CONCLUSIONS: Children of all ages appeared susceptible to COVID-19, and there was no significant sex difference. Although clinical manifestations of children's COVID-19 cases were generally less severe than those of adult patients, young children, particularly infants, were vulnerable to infection. The distribution of children's COVID-19 cases varied with time and space, and most of the cases were concentrated in Hubei province and surrounding areas. Furthermore, this study provides strong evidence of human-to-human transmission.

Agriculture2020American Academy of Pediatrics
Periodicals

New handbook for standardised measurement of plant functional traits worldwide

Plant functional traits are the features (morphological, physiological, phenological) that represent ecological strategies and determine how plants respond to environmental factors, affect other trophic levels and influence ecosystem properties. Variation in plant functional traits, and trait syndromes, has proven useful for tackling many important ecological questions at a range of scales, giving rise to a demand for standardised ways to measure ecologically meaningful plant traits. This line of research has been among the most fruitful avenues for understanding ecological and evolutionary patterns and processes. It also has the potential both to build a predictive set of local, regional and global relationships between plants and environment and to quantify a wide range of natural and human-driven processes, including changes in biodiversity, the impacts of species invasions, alterations in biogeochemical processes and vegetation–atmosphere interactions. The importance of these topics dictates the urgent need for more and better data, and increases the value of standardised protocols for quantifying trait variation of different species, in particular for traits with power to predict plant- and ecosystem-level processes, and for traits that can be measured relatively easily. Updated and expanded from the widely used previous version, this handbook retains the focus on clearly presented, widely applicable, step-by-step recipes, with a minimum of text on theory, and not only includes updated methods for the traits previously covered, but also introduces many new protocols for further traits. This new handbook has a better balance between whole-plant traits, leaf traits, root and stem traits and regenerative traits, and puts particular emphasis on traits important for predicting species’ effects on key ecosystem properties. We hope this new handbook becomes a standard companion in local and global efforts to learn about the responses and impacts of different plant species with respect to environmental changes in the present, past and future.

Agriculture2013CSIRO Publishing
Periodicals

Soil bacterial and fungal communities across a pH gradient in an arable soil

Soils collected across a long-term liming experiment (pH 4.0-8.3), in which variation in factors other than pH have been minimized, were used to investigate the direct influence of pH on the abundance and composition of the two major soil microbial taxa, fungi and bacteria. We hypothesized that bacterial communities would be more strongly influenced by pH than fungal communities. To determine the relative abundance of bacteria and fungi, we used quantitative PCR (qPCR), and to analyze the composition and diversity of the bacterial and fungal communities, we used a bar-coded pyrosequencing technique. Both the relative abundance and diversity of bacteria were positively related to pH, the latter nearly doubling between pH 4 and 8. In contrast, the relative abundance of fungi was unaffected by pH and fungal diversity was only weakly related with pH. The composition of the bacterial communities was closely defined by soil pH; there was as much variability in bacterial community composition across the 180-m distance of this liming experiment as across soils collected from a wide range of biomes in North and South America, emphasizing the dominance of pH in structuring bacterial communities. The apparent direct influence of pH on bacterial community composition is probably due to the narrow pH ranges for optimal growth of bacteria. Fungal community composition was less strongly affected by pH, which is consistent with pure culture studies, demonstrating that fungi generally exhibit wider pH ranges for optimal growth.

Agriculture2010Springer Nature
Periodicals

Heavy metal pollution in the environment and their toxicological effects on humans

Environmental pollution of heavy metals is increasingly becoming a problem and has become of great concern due to the adverse effects it is causing around the world. These inorganic pollutants are being discarded in our waters, soils and into the atmosphere due to the rapidly growing agriculture and metal industries, improper waste disposal, fertilizers and pesticides. This review shows how pollutants enter the environment together with their fate. Some metals affect biological functions and growth, while other metals accumulate in one or more different organs causing many serious diseases such as cancer. The pharmacokinetics and toxicological processes in humans for each metal is described. In summary, the review shows the physiological and biochemical effects of each heavy metal bioaccumulation in humans and the level of gravity and disquieting factor of the disease.

Agriculture2020Elsevier BV
Periodicals

The Delphi Technique: Making Sense of Consensus

The Delphi technique is a widely used and accepted method for gathering data from respondents within their domain of expertise. The technique is designed as a group communication process which aims to achieve a convergence of opinion on a specific real-world issue. The Delphi process has been used in various fields of study such as program planning, needs assessment, policy determination, and resource utilization to develop a full range of alternatives, explore or expose underlying assumptions, as well as correlate judgments on a topic spanning a wide range of disciplines. The Delphi technique is well suited as a method for consensus-building by using a series of questionnaires delivered using multiple iterations to collect data from a panel of selected subjects. Subject selection, time frames for conducting and completing a study, the possibility of low response rates, and unintentionally guiding feedback from the respondent group are areas which should be considered when designing and implementing a Delphi study. Accessed 68,465 times on https://pareonline.net from August 30, 2007 to December 31, 2019. For downloads from January 1, 2020 forward, please click on the PlumX Metrics link to the right.

Agriculture2020University of Massachusetts Amherst
Periodicals

Are We There Yet? Data Saturation in Qualitative Research

Failure to reach data saturation has an impact on the quality of the research conducted and hampers content validity. The aim of a study should include what determines when data saturation is achieved, for a small study will reach saturation more rapidly than a larger study. Data saturation is reached when there is enough information to replicate the study when the ability to obtain additional new information has been attained, and when further coding is no longer feasible. The following article critiques two qualitative studies for data saturation: Wolcott (2004) and Landau and Drori (2008). Failure to reach data saturation has a negative impact on the validity on one’s research. The intended audience is novice student researchers.

Agriculture2015Nova Southeastern University
Periodicals

The Model of Emissions of Gases and Aerosols from Nature version 2.1 (MEGAN2.1): an extended and updated framework for modeling biogenic emissions

Abstract. The Model of Emissions of Gases and Aerosols from Nature version 2.1 (MEGAN2.1) is a modeling framework for estimating fluxes of biogenic compounds between terrestrial ecosystems and the atmosphere using simple mechanistic algorithms to account for the major known processes controlling biogenic emissions. It is available as an offline code and has also been coupled into land surface and atmospheric chemistry models. MEGAN2.1 is an update from the previous versions including MEGAN2.0, which was described for isoprene emissions by Guenther et al. (2006) and MEGAN2.02, which was described for monoterpene and sesquiterpene emissions by Sakulyanontvittaya et al. (2008). Isoprene comprises about half of the total global biogenic volatile organic compound (BVOC) emission of 1 Pg (1000 Tg or 1015 g) estimated using MEGAN2.1. Methanol, ethanol, acetaldehyde, acetone, α-pinene, β-pinene, t-β-ocimene, limonene, ethene, and propene together contribute another 30% of the MEGAN2.1 estimated emission. An additional 20 compounds (mostly terpenoids) are associated with the MEGAN2.1 estimates of another 17% of the total emission with the remaining 3% distributed among >100 compounds. Emissions of 41 monoterpenes and 32 sesquiterpenes together comprise about 15% and 3%, respectively, of the estimated total global BVOC emission. Tropical trees cover about 18% of the global land surface and are estimated to be responsible for ~80% of terpenoid emissions and ~50% of other VOC emissions. Other trees cover about the same area but are estimated to contribute only about 10% of total emissions. The magnitude of the emissions estimated with MEGAN2.1 are within the range of estimates reported using other approaches and much of the differences between reported values can be attributed to land cover and meteorological driving variables. The offline version of MEGAN2.1 source code and driving variables is available from

Agriculture2012Copernicus Publications
Periodicals

Mechanisms of plant survival and mortality during drought: why do some plants survive while others succumb to drought?

Severe droughts have been associated with regional-scale forest mortality worldwide. Climate change is expected to exacerbate regional mortality events; however, prediction remains difficult because the physiological mechanisms underlying drought survival and mortality are poorly understood. We developed a hydraulically based theory considering carbon balance and insect resistance that allowed development and examination of hypotheses regarding survival and mortality. Multiple mechanisms may cause mortality during drought. A common mechanism for plants with isohydric regulation of water status results from avoidance of drought-induced hydraulic failure via stomatal closure, resulting in carbon starvation and a cascade of downstream effects such as reduced resistance to biotic agents. Mortality by hydraulic failure per se may occur for isohydric seedlings or trees near their maximum height. Although anisohydric plants are relatively drought-tolerant, they are predisposed to hydraulic failure because they operate with narrower hydraulic safety margins during drought. Elevated temperatures should exacerbate carbon starvation and hydraulic failure. Biotic agents may amplify and be amplified by drought-induced plant stress. Wet multidecadal climate oscillations may increase plant susceptibility to drought-induced mortality by stimulating shifts in hydraulic architecture, effectively predisposing plants to water stress. Climate warming and increased frequency of extreme events will probably cause increased regional mortality episodes. Isohydric and anisohydric water potential regulation may partition species between survival and mortality, and, as such, incorporating this hydraulic framework may be effective for modeling plant survival and mortality under future climate conditions.

Agriculture2008Wiley
Periodicals

The 1996 Guide for the Care and Use of Laboratory Animals

The Guide for the Care and Use of Laboratory Animals (the Guide) was first published in 1963 under the title Guide for Laboratory Animal Facilities and Care and was revised in 1965, 1968, 1972, 1978, and 1985. More than 400,000 copies have been distributed since it was first published, and it is widely accepted as a primary reference on animal care and use. In 1991, an ad hoc committee appointed by the Institute of Laboratory Animal Resources (ILAR) recommended that the Guide be revised. The Committee to Revise the Guide for the Care and Use of Laboratory Animals (the Committee) (see roster p 47) was appointed in 1993 by the National Research Council; its 15 members included research scientists, veterinarians, and nonscientists representing bioethics and the public's interest in animal welfare. The purpose of the Guide, as expressed in the charge to the Committee to Revise the Guide, is to assist institutions in caring for and using animals in ways judged to be scientifically, technically, and humanely appropriate. The Guide is also intended to assist investigators in fulfilling their obligation to plan and conduct animal experiments in accord with the highest scientific, humane, and ethical principles. The recommendations are based on published data, scientific principles, expert opinion, and experience with methods and practices that have proved to be consistent with high-quality, humane animal care and use. The introduction to the first Guide stated that ‘If the Guide is to serve usefully, it must be a living document, subject to change with changing conditions and new information.” This philosophy has been supported and implemented in subsequent Guides . The Guide is written for a diverse group of national and international institutions and organizations, and its guidelines are applied to many species of animals in varied settings, types of institutions, and uses (for example, facilities can range from a Biosafety Level 4 containment facility to a farm pasture). Guidelines and standards for a specific animal species, in a specific setting, in a specific institution, and for a specific use may be relatively easy to write. However, such narrowly focused guidelines or standards may be inappropriate, harmful, ineffective, or counterproductive when applied to other species or situations. Because guidelines for animal care and use with broad applicability are needed, the Guide often makes general recommendations, the details of which must be addressed locally with specific standard operating procedures, decisions by animal care personnel and users, and institutional animal care and use committee (IACUC) approvals. The Introduction and Chapter I of the Guide emphasize the important role of the IACUC in implementing the guidelines and identifies its authority, responsibility, and discretion in this role. The ’85 Guide ( NRC 1985 ) has been a good and useful document and did not need to be completely rewritten. The Committee's goals were to (1) update the document to make the ’96 Guide current in compliance areas, state-of-the-art techniques and equipment, and science; and (2) use performance standards rather than engineering standards whenever appropriate. Since 1961, the process of developing the Guide has been independent of governmental influence. There has been a concerted effort, first by the Animal Care Panel and later by the National Academy of Sciences (NAS), to appoint unbiased, objective, balanced, expert committees. Each committee has been charged with the task of formulating appropriate guidelines, taking into consideration such critical factors as species of animals, research uses of animals, settings in which animals are used, necessary resources, and ethical considerations. This process has been very effective and has served the scientific community and animals used in research well. Much of the information in earlier guidelines was based on experience, professional judgment, and arbitrary decisions rather than objective peer-reviewed data. To some extent this is still true. After the first Guide, each revised edition has been based on preceding versions and expanded and updated as appropriate based on factors improving research quality and animal well-being. Some aspects of recent Guides have changed very little from earlier editions. Previous Guides were excellent documents for their times, have served us well, and are tributes to the leadership and vision of early writers. The care and use of animals evoke strong emotions and opinions. It is unrealistic to expect that everyone will agree with every aspect of the Guide . No person or committee could write a document that is universally acceptable. Committees are used so that different ideas and approaches can be presented, discussed, and resolved. The Guide is a consensus document resulting from the discussions and decisions of a committee composed of individuals with differing ideas, perspectives, and approaches. The ’96 Guide Committee did not deliberate in a vacuum. We received extensive input from the general public, animal welfare advocates, and the scientific community through public hearings, other oral comments, and several hundred written comments. We relied on scientific literature (assisted by the bibliographic search services of the Animal Welfare Information Center) in our deliberations. We solicited information from experts on selected topics. Unfortunately, in many areas of the Guide, objective peer-reviewed data to substantiate specific practices may be lacking, contradictory, or ambiguous. Available data may not be applicable to the diverse settings covered by the Guide . For example, while some data is available on a given topic involving very specific circumstances applicable only to a very limited set of research settings, its application to general guidelines for all research settings could be problematic. The Committee used carefully chosen wording when making recommendations in such areas, and empowered the IACUC to use performance standards to interpret and adapt recommendations to specific settings. In updating the guidelines the Committee spent considerable effort to add explanatory material including references to assist the reader in understanding the rationale behind recommendations thereby making it easier to apply them in specific settings. Three documents affect the conduct of animal care and use: the Guide, the Animal Welfare Regulations or AWRs (9 CFR 1-3), and the Public Health Service Policy on Humane Care and Use of Laboratory Animals or PHS Policy ( PHS 1986 ). The Guide predates the Animal Welfare Act (AWA) and the PHS Policy . The first Guide was published in 1963; the first AWA regulations were released in 1966; and the first National Institutes of Health (later PHS) policy was issued in 1971. The AWA (implemented by the U.S. Department of Agriculture or USDA) and PHS Policy (implemented by the National Institutes of Health, Office for Protection from Research Risks or OPRR) are regulations, written by government officials. The NAS uses a ‘peer” process allowing the scientific community considerable input into animal care and use and self-governance via the Guide . The scientific community, through this process, has been encouraged and enabled to move torward to provide contemporary guidelines for animal care and use. Prior to the 1985 edition, there was much disparity between the Guide, the AWRs, and the PHS Policy . Prior Guides were more comprehensive, and the recommendations were more extensive and thorough than previous AWRs. However, the AWRs based on the 1985 AWA are similar to the ’85 Guide recommendations. The 1986 PHS Policy was expanded and provided more details than previous ones. This interrelationship and congruence of the Guide, the AWRs, and the PHS Policy caused a dilemma for the ’96 Guide Committee since any variance from federal regulation and policy would be considered to be noncompliant. The Committee considered 2 factors in dealing with this issue. We felt obligated to society, science, and animals to update and improve the previous guidelines where possible. The ’85 Guide and the AWRs were based on the state-of-the-art practices and science of the early 80s. Ten to 15 years have now elapsed. When the scientific community, represented by the Guide Committee, was aware of new information or ways to improve animal care and use, it was our obligation to address it rather than ignore it. Since the Committee's goal was to write contemporary guidelines, we did not feel limited by outdated information or restricted by existing regulations. The Guide is not intended to be an ancillary set of specifications for the USDA. The Guide has broader and more universal use than just by AWA and OPRR regulated institutions. In the United States, there are perhaps hundreds of users and potential users not covered by the AWRs or funded by the Public Health Service. In addition, the Guide has been used as a reference in other countries. In recent years, there has been much discussion about engineering versus performance standards. Engineering standards are prescriptive, design and program oriented, and do not specify goals or outcomes. They do not allow for professional judgment or modification in the event that acceptable alternative methods are available or unusual circumstances arise. They constitute a ‘one-size-fits-all” approach. Conversely, performance standards are outcome oriented. Performance standards define outcomes and provide criteria for assessing the outcomes but do not limit the methods by which the outcomes can be achieved. This performance approach is desirable because many variables (such as the species and previous history of the animals, facilities, expertise of personnel, and research goals) often make the engineering approach impractical or unwarranted. Animal care and use have been moving toward the performance-based approach for years. Examples include assessment of effectiveness of sanitation; assessment of air quality and heating, ventilation, and air-conditioning effectiveness; and veterinary care (e.g., animal health surveillance and surgery). In the past decade, the performance-based concept has gained momentum. There is more on animal care and use from an and making research more animal and We are moving from standards and of and to a which some in standards and on animal and conditions the of the The ’96 Guide is a Guide . we it will be as a Guide in the from engineering to performance standards. to with farm animals in research and has been an for years. The has versus use. This has to the of 2 of guidelines, the Guide for the Care and Use of Laboratory Animals and the Guide for the Care and Use of Animals in Research and Guide) . The Guide and the Guide have different The objective of the Guide for animals is to assist institutions in caring for and using animals in or and in ways judged to be scientifically, technically, and humanely appropriate. The Guide as an alternative to the Guide and intended to serve institutions and research as a primary reference on the care and use of the animal species in the United in research and for of scientific and applicability of must be in or settings. It is to serve as an independent reference for the care and use of animals just as the National Institutes of Health Guide for the Care and Use of Laboratory Animals ( NRC 1985 ) has served users of animals in research and ( for a Guide ). It has been that the Guide and Guide be It would be to the 2 Guides since have some goals and but there would still need to be different and different recommendations for animals in different settings. The ’96 Guide to all animals, including farm animals, used in The ’96 is that farm animals used in research can be in a animal or on a their and for the the Guide for animals settings and farm settings. and care for farm animals used in research or not from in Animals used in or research may be in or or in or Some can be in farm settings, and some need conditions to on research uses of farm animals, the or and standards for their care and use be based on and for animal well-being. may decisions be locally by the of the of institutions are to provide of all research animals and that their and are Information on farm animals is in all the Guide rather than in a farm animal There was a effort to make that applied to farm animals to an Some are of farm animal and of the animals and general reference to not The ’96 Guide has been and rewritten. It is into an introduction and 4 on the of an animal care and use institutional and animal and veterinary and of institutional institutional animal care and use and are in each The introduction has been expanded and about use of farm animals, species, and The of animals has been expanded from to include all The more important and in through 4 are The title of Chapter has been changed to and institutional and institutional personnel or that be or addressed in a document the Guide that must have general The Guide the institutional to that IACUC members are to the revised Guide the to IACUC members by to appropriate resources, specific institutional is the conduct of an health and The role and of were updated and expanded to more contemporary and to the AWRs and PHS Policy . The 2 documents IACUC and The ’96 Guide is not in compliance with For example, the ’96 Guide that the public not be a animal The of IACUC in implementing the Guide is of the (such as animal species and Much is focused on and recommendations are that apply to and of There is a broader range of that be considered in and of such as and are Examples of of have been expanded to include of animal Guidelines on and have been all are and the is not to be important objective of the Committee when was to make that the IACUC has and for and of use, and humane of animals its and animal care personnel are given discretion in to in to institutional and IACUC in Chapter the Committee considered it important to that have to and to their in their The Guide that new information may and are the must be as our of The IACUC is now charged with a for and of involving the care and use of animals the Previous Guides provided about this important issue. with the that health and must be of the institutional animal care and use this topic has been and The and for institutional and in are The recommendations the new document Health and in the Care of Research Animals in Guidelines are more on and for The reference to animal of previous Guides has been It was that in the not be based on the or of animal There is more on of the and the rather than such broad The of Chapter 2 has been that of The have been or expanded into on and much of the material from the ’85 Guide has been The of the more information on the general factors that be considered when to and care for of and are and decisions are the of the the and the The of the and be of the with of and It is that the in can be and that of the of the be necessary in to that the is appropriate. of acceptable primary the for reference to such as the of the and design are but that may be acceptable in some circumstances and that is of only its the health or of the such as and are and it is that may different It is that consideration be given to that provide for the of the on or and have been It was that and may be acceptable in many situations. and specific for types of are The on recommendations with the has not been changed with to However, the general philosophy has recommendations are as or The recommendations allow use of professional judgment and performance-based outcomes. The Guide on to and outcomes of decisions to use that from Guide recommendations. animal performance criteria for are performance specifications must be of the recommendations in the This is important for animals that in the or group is encouraged for group animal may be because of the each uses the For some species such as more may be in group situations. In addition, and not completely the of the The recommendations have been changed from to of the has been changed and is on the need for more for animals that the in the for have been for in the United and areas based on are on or in or into were in previous of the Guide with some in with the The change in recommendations which have been into and There are now of The Committee also that have specific that were not by the in the previous Guide . For example, in the ’85 Guide recommended for animals to were for or but were not for were also for the use of by of the for and into consideration the of and It was also that animals of species do not the as do For used farm animals specific recommendations are given for animals, that the previous Guide did not address this to in was since this is a used in situations. This of used, be by the IACUC and the Guide be to for recommended to for has also been This of be considered a of consideration of the and for The guidelines on and are the with 2 The recommended range for has been to the for many institutions in previous guidelines and the of the animals to adapt to recommendations have also been changed to a standard a acceptable for animals are The guidelines on have been expanded but still that air is a good general criteria and for more the of animals under different are such as with of the primary and with conditions are and recommendations for are also aspects of the have changed very information and references are provided on the of on The Guide that the for may not be applicable to animals and on have been and and other are are of the or an has been and and discussion of and and a on More on and is is The many criteria that must be considered for such the of animals, are is not only in of but in of and for In to are have been updated and some areas have been The guidelines on include use of as an alternative to use of or for and and the use of varied and of Some discussion and information are provided on for is in are for were changed very It is that used by may the of in some types of is when using since it may and the of The on has been and More criteria are provided with which to performance and outcomes of is as a of It be an acceptable of in such as farm animal or other settings but not in more animal settings. The and of may in different settings based on factors including the or guidelines on of change are not but of outcomes be Guidelines on the use of for are the concept of is can be with the appropriate of and of of the with from or more as a of of between is that may be in areas that similar of of in animal is not on and and care have been expanded but It is that animal care and use have a This information provided on and have been expanded to include the use of for on the of and information on the on veterinary care the of the 1985 Guide . However, a of in or have been to address new and The of an effective veterinary care program were expanded to include of or other and of animal well-being. were not as specific in the ’85 Guide, are not new They a to and that factors the health and of animals are for and veterinary This has been expanded to the of that and to The need for to all and regulations in animals is as it to and or and has been expanded and such as and to animals (such as and to that are not into existing are The of is when in In the and of the of animals is to that more may be in such as or In some it may be impractical or to each animal such as when animals are in settings. The of health surveillance is The is expanded to include the of personnel and animal and the of the The of and thorough assessment of outcomes is to that the are appropriate and that are The of techniques and that are appropriate for and farm animals are in than in the ’85 Guide, with an on the of outcomes to animal well-being. This has been expanded to emphasize the of to of in species and the appropriate for specific This has been expanded to include criteria to use in the for criteria for that that the is humane and the objective of the is achieved. This also the of understanding that some and can experience when with The of the ’96 Guide a that effective and design include input from personnel with animal facility design and and users of the is also provided desirable of including the use of on with which animals will have The ’96 Guide to include areas for and are The ’96 Guide that to will the of than to it be to It is recommended that and be or to by the of The ’96 Guide a for in where to or is It is also recommended that be to be from the a are not a as may be useful as a of for some are where be regulated because of or through the where is an important or there is a The of of is are in some areas and for some species (such as farm The specific for of was in of a that be for In the ’96 and and are in The ’85 Guide included a range of to This was and the ’96 Guide just to or of the recommendations stated in Chapter new are included in the ’96 Guide . It is recommended that the be for of and The ’96 Guide and to be for species in or It is that and in and are by to may include and is or and air are recommended for The ’96 Guide a more on the need for an alternative or in the event of be to and by equipment, and public address for and are In the ’96 Guide there is that the species and of the There are specific recommendations for and farm animal The ’96 Guide still of animal operating and The of is by but it is that this may be by between areas or by and appropriate and between there is more on the of and is in the and to and the was Since the Guide for the Care and Use of Laboratory Animals has served as a contemporary for animal care and use in the United The ’96 Guide is the The purpose of the Guide is to assist institutions in developing and animal care and use that are scientifically, technically, and humanely appropriate and to assist investigators in fulfilling their obligation to plan and conduct animal experiments in accord with the highest scientific, humane, and ethical principles. of the Guide was a process by an unbiased, objective, balanced, expert committee appointed by the National Academy of It has been by the scientific community as a of a self-governance rather than as a or policy document of the The Guide is written for a diverse group of users, and its guidelines are intended to be applied to many species of animals in varied settings, types of institutions, and The recommendations are based on published data, scientific principles, expert opinion, and experience with methods and practices that have proved to be consistent with high-quality, humane animal care and use. The Guide often makes general recommendations, the details of which must be addressed locally with specific standard operating procedures, decisions by animal care personnel and users, and institutional animal care and use committee (IACUC) approvals. The ’96 Guide has been updated with to state-of-the-art techniques and equipment, and consideration of new scientific data. It a from engineering to performance standards. This approach a on animal and or of appropriate assessment criteria for specific situations. The Guide research into methods of animal care and use. users, animal care and must use professional judgment in making specific decisions animal care and use. The Guide has been to include an introduction and 4 on the of an animal care and use institutional and animal and veterinary and

Agriculture1997Oxford University Press
Periodicals

Plant Phenolics: Extraction, Analysis and Their Antioxidant and Anticancer Properties

Phenolics are broadly distributed in the plant kingdom and are the most abundant secondary metabolites of plants. Plant polyphenols have drawn increasing attention due to their potent antioxidant properties and their marked effects in the prevention of various oxidative stress associated diseases such as cancer. In the last few years, the identification and development of phenolic compounds or extracts from different plants has become a major area of health- and medical-related research. This review provides an updated and comprehensive overview on phenolic extraction, purification, analysis and quantification as well as their antioxidant properties. Furthermore, the anticancer effects of phenolics in-vitro and in-vivo animal models are viewed, including recent human intervention studies. Finally, possible mechanisms of action involving antioxidant and pro-oxidant activity as well as interference with cellular functions are discussed.

Agriculture2010Multidisciplinary Digital Publishing Institute
Periodicals

Object based image analysis for remote sensing

Remote sensing imagery needs to be converted into tangible information which can be utilised in conjunction with other data sets, often within widely used Geographic Information Systems (GIS). As long as pixel sizes remained typically coarser than, or at the best, similar in size to the objects of interest, emphasis was placed on per-pixel analysis, or even sub-pixel analysis for this conversion, but with increasing spatial resolutions alternative paths have been followed, aimed at deriving objects that are made up of several pixels. This paper gives an overview of the development of object based methods, which aim to delineate readily usable objects from imagery while at the same time combining image processing and GIS functionalities in order to utilize spectral and contextual information in an integrative way. The most common approach used for building objects is image segmentation, which dates back to the 1970s. Around the year 2000 GIS and image processing started to grow together rapidly through object based image analysis (OBIA - or GEOBIA for geospatial object based image analysis). In contrast to typical Landsat resolutions, high resolution images support several scales within their images. Through a comprehensive literature review several thousand abstracts have been screened, and more than 820 OBIA-related articles comprising 145 journal papers, 84 book chapters and nearly 600 conference papers, are analysed in detail. It becomes evident that the first years of the OBIA/GEOBIA developments were characterised by the dominance of ‘grey’ literature, but that the number of peer-reviewed journal articles has increased sharply over the last four to five years. The pixel paradigm is beginning to show cracks and the OBIA methods are making considerable progress towards a spatially explicit information extraction workflow, such as is required for spatial planning as well as for many monitoring programmes.

Agriculture2009Elsevier BV
Periodicals

Landscape perspectives on agricultural intensification and biodiversity – ecosystem service management

Abstract Understanding the negative and positive effects of agricultural land use for the conservation of biodiversity, and its relation to ecosystem services, needs a landscape perspective. Agriculture can contribute to the conservation of high‐diversity systems, which may provide important ecosystem services such as pollination and biological control via complementarity and sampling effects. Land‐use management is often focused on few species and local processes, but in dynamic, agricultural landscapes, only a diversity of insurance species may guarantee resilience (the capacity to reorganize after disturbance). Interacting species experience their surrounding landscape at different spatial scales, which influences trophic interactions. Structurally complex landscapes enhance local diversity in agroecosystems, which may compensate for local high‐intensity management. Organisms with high‐dispersal abilities appear to drive these biodiversity patterns and ecosystem services, because of their recolonization ability and larger resources experienced. Agri‐environment schemes (incentives for farmers to benefit the environment) need to broaden their perspective and to take the different responses to schemes in simple (high impact) and complex (low impact) agricultural landscapes into account. In simple landscapes, local allocation of habitat is more important than in complex landscapes, which are in total at risk. However, little knowledge of the relative importance of local and landscape management for biodiversity and its relation to ecosystem services make reliable recommendations difficult.

Agriculture2005Wiley
Periodicals

Review on Zinc Oxide Nanoparticles: Antibacterial Activity and Toxicity Mechanism

Antibacterial activity of zinc oxide nanoparticles (ZnO-NPs) has received significant interest worldwide particularly by the implementation of nanotechnology to synthesize particles in the nanometer region. Many microorganisms exist in the range from hundreds of nanometers to tens of micrometers. ZnO-NPs exhibit attractive antibacterial properties due to increased specific surface area as the reduced particle size leading to enhanced particle surface reactivity. ZnO is a bio-safe material that possesses photo-oxidizing and photocatalysis impacts on chemical and biological species. This review covered ZnO-NPs antibacterial activity including testing methods, impact of UV illumination, ZnO particle properties (size, concentration, morphology, and defects), particle surface modification, and minimum inhibitory concentration. Particular emphasize was given to bactericidal and bacteriostatic mechanisms with focus on generation of reactive oxygen species (ROS) including hydrogen peroxide (H2O2), OH− (hydroxyl radicals), and O2 −2 (peroxide). ROS has been a major factor for several mechanisms including cell wall damage due to ZnO-localized interaction, enhanced membrane permeability, internalization of NPs due to loss of proton motive force and uptake of toxic dissolved zinc ions. These have led to mitochondria weakness, intracellular outflow, and release in gene expression of oxidative stress which caused eventual cell growth inhibition and cell death. In some cases, enhanced antibacterial activity can be attributed to surface defects on ZnO abrasive surface texture. One functional application of the ZnO antibacterial bioactivity was discussed in food packaging industry where ZnO-NPs are used as an antibacterial agent toward foodborne diseases. Proper incorporation of ZnO-NPs into packaging materials can cause interaction with foodborne pathogens, thereby releasing NPs onto food surface where they come in contact with bad bacteria and cause the bacterial death and/or inhibition.

Agriculture2015Springer Science+Business Media
Periodicals

Worldwide trends in diabetes since 1980: a pooled analysis of 751 population-based studies with 4·4 million participants

BACKGROUND: One of the global targets for non-communicable diseases is to halt, by 2025, the rise in the age-standardised adult prevalence of diabetes at its 2010 levels. We aimed to estimate worldwide trends in diabetes, how likely it is for countries to achieve the global target, and how changes in prevalence, together with population growth and ageing, are affecting the number of adults with diabetes. METHODS: We pooled data from population-based studies that had collected data on diabetes through measurement of its biomarkers. We used a Bayesian hierarchical model to estimate trends in diabetes prevalence-defined as fasting plasma glucose of 7.0 mmol/L or higher, or history of diagnosis with diabetes, or use of insulin or oral hypoglycaemic drugs-in 200 countries and territories in 21 regions, by sex and from 1980 to 2014. We also calculated the posterior probability of meeting the global diabetes target if post-2000 trends continue. FINDINGS: We used data from 751 studies including 4,372,000 adults from 146 of the 200 countries we make estimates for. Global age-standardised diabetes prevalence increased from 4.3% (95% credible interval 2.4-7.0) in 1980 to 9.0% (7.2-11.1) in 2014 in men, and from 5.0% (2.9-7.9) to 7.9% (6.4-9.7) in women. The number of adults with diabetes in the world increased from 108 million in 1980 to 422 million in 2014 (28.5% due to the rise in prevalence, 39.7% due to population growth and ageing, and 31.8% due to interaction of these two factors). Age-standardised adult diabetes prevalence in 2014 was lowest in northwestern Europe, and highest in Polynesia and Micronesia, at nearly 25%, followed by Melanesia and the Middle East and north Africa. Between 1980 and 2014 there was little change in age-standardised diabetes prevalence in adult women in continental western Europe, although crude prevalence rose because of ageing of the population. By contrast, age-standardised adult prevalence rose by 15 percentage points in men and women in Polynesia and Micronesia. In 2014, American Samoa had the highest national prevalence of diabetes (>30% in both sexes), with age-standardised adult prevalence also higher than 25% in some other islands in Polynesia and Micronesia. If post-2000 trends continue, the probability of meeting the global target of halting the rise in the prevalence of diabetes by 2025 at the 2010 level worldwide is lower than 1% for men and is 1% for women. Only nine countries for men and 29 countries for women, mostly in western Europe, have a 50% or higher probability of meeting the global target. INTERPRETATION: Since 1980, age-standardised diabetes prevalence in adults has increased, or at best remained unchanged, in every country. Together with population growth and ageing, this rise has led to a near quadrupling of the number of adults with diabetes worldwide. The burden of diabetes, both in terms of prevalence and number of adults affected, has increased faster in low-income and middle-income countries than in high-income countries. FUNDING: Wellcome Trust.

Agriculture2016Elsevier BV
Periodicals

Global, regional, and national burden of diabetes from 1990 to 2021, with projections of prevalence to 2050: a systematic analysis for the Global Burden of Disease Study 2021

BACKGROUND: Diabetes is one of the leading causes of death and disability worldwide, and affects people regardless of country, age group, or sex. Using the most recent evidentiary and analytical framework from the Global Burden of Diseases, Injuries, and Risk Factors Study (GBD), we produced location-specific, age-specific, and sex-specific estimates of diabetes prevalence and burden from 1990 to 2021, the proportion of type 1 and type 2 diabetes in 2021, the proportion of the type 2 diabetes burden attributable to selected risk factors, and projections of diabetes prevalence through 2050. METHODS: Estimates of diabetes prevalence and burden were computed in 204 countries and territories, across 25 age groups, for males and females separately and combined; these estimates comprised lost years of healthy life, measured in disability-adjusted life-years (DALYs; defined as the sum of years of life lost [YLLs] and years lived with disability [YLDs]). We used the Cause of Death Ensemble model (CODEm) approach to estimate deaths due to diabetes, incorporating 25 666 location-years of data from vital registration and verbal autopsy reports in separate total (including both type 1 and type 2 diabetes) and type-specific models. Other forms of diabetes, including gestational and monogenic diabetes, were not explicitly modelled. Total and type 1 diabetes prevalence was estimated by use of a Bayesian meta-regression modelling tool, DisMod-MR 2.1, to analyse 1527 location-years of data from the scientific literature, survey microdata, and insurance claims; type 2 diabetes estimates were computed by subtracting type 1 diabetes from total estimates. Mortality and prevalence estimates, along with standard life expectancy and disability weights, were used to calculate YLLs, YLDs, and DALYs. When appropriate, we extrapolated estimates to a hypothetical population with a standardised age structure to allow comparison in populations with different age structures. We used the comparative risk assessment framework to estimate the risk-attributable type 2 diabetes burden for 16 risk factors falling under risk categories including environmental and occupational factors, tobacco use, high alcohol use, high body-mass index (BMI), dietary factors, and low physical activity. Using a regression framework, we forecast type 1 and type 2 diabetes prevalence through 2050 with Socio-demographic Index (SDI) and high BMI as predictors, respectively. FINDINGS: In 2021, there were 529 million (95% uncertainty interval [UI] 500-564) people living with diabetes worldwide, and the global age-standardised total diabetes prevalence was 6·1% (5·8-6·5). At the super-region level, the highest age-standardised rates were observed in north Africa and the Middle East (9·3% [8·7-9·9]) and, at the regional level, in Oceania (12·3% [11·5-13·0]). Nationally, Qatar had the world's highest age-specific prevalence of diabetes, at 76·1% (73·1-79·5) in individuals aged 75-79 years. Total diabetes prevalence-especially among older adults-primarily reflects type 2 diabetes, which in 2021 accounted for 96·0% (95·1-96·8) of diabetes cases and 95·4% (94·9-95·9) of diabetes DALYs worldwide. In 2021, 52·2% (25·5-71·8) of global type 2 diabetes DALYs were attributable to high BMI. The contribution of high BMI to type 2 diabetes DALYs rose by 24·3% (18·5-30·4) worldwide between 1990 and 2021. By 2050, more than 1·31 billion (1·22-1·39) people are projected to have diabetes, with expected age-standardised total diabetes prevalence rates greater than 10% in two super-regions: 16·8% (16·1-17·6) in north Africa and the Middle East and 11·3% (10·8-11·9) in Latin America and Caribbean. By 2050, 89 (43·6%) of 204 countries and territories will have an age-standardised rate greater than 10%. INTERPRETATION: Diabetes remains a substantial public health issue. Type 2 diabetes, which makes up the bulk of diabetes cases, is largely preventable and, in some cases, potentially reversible if identified and managed early in the disease course. However, all evidence indicates that diabetes prevalence is increasing worldwide, primarily due to a rise in obesity caused by multiple factors. Preventing and controlling type 2 diabetes remains an ongoing challenge. It is essential to better understand disparities in risk factor profiles and diabetes burden across populations, to inform strategies to successfully control diabetes risk factors within the context of multiple and complex drivers. FUNDING: Bill & Melinda Gates Foundation.

Agriculture2023Elsevier BV
Periodicals

International regimes, transactions, and change: embedded liberalism in the postwar economic order

The prevailing model of international economic regimes is strictly positivistic in its epistemological orientation and stresses the distribution of material power capabilities in its explanatory logic. It is inadequate to account for the current set of international economic regimes and for the differences between past and present regimes. The model elaborated here departs from the prevailing view in two respects, while adhering to it in a third. First, it argues that regimes comprise not simply what actors say and do, but also what they understand and find acceptable within an intersubjective framework of meaning. Second, it argues that in the economic realm such a framework of meaning cannot be deduced from the distribution of material power capabilities, but must be sought in the configuration of state-society relations that is characteristic of the regime-making states. Third, in incorporating these notions into our understanding of the formation and transformation of international economic regimes, the formulation self-consciously strives to remain at the systemic level and to avoid becoming reductionist in attributing cause and effect relations. The article can therefore argue that the prevailing view is deficient on its own terms and must be expanded and modified. Addressing the world of actual international economic regimes, the article argues that the pax Britannica and the pax Americana cannot be equated in any meaningful sense, and that the postwar regimes for money and trade live on notwithstanding premature announcements of their demise.

Agriculture1982University of Cambridge
Periodicals

Pharmaceuticals and personal care products in the environment: agents of subtle change?

During the last three decades, the impact of chemical pollution has focused almost exclusively on the conventional "priority" pollutants, especially those acutely toxic/carcinogenic pesticides and industrial intermediates displaying persistence in the environment. This spectrum of chemicals, however, is only one piece of the larger puzzle in "holistic" risk assessment. Another diverse group of bioactive chemicals receiving comparatively little attention as potential environmental pollutants includes the pharmaceuticals and active ingredients in personal care products (in this review collectively termed PPCPs), both human and veterinary, including not just prescription drugs and biologics, but also diagnostic agents, "nutraceuticals," fragrances, sun-screen agents, and numerous others. These compounds and their bioactive metabolites can be continually introduced to the aquatic environment as complex mixtures via a number of routes but primarily by both untreated and treated sewage. Aquatic pollution is particularly troublesome because aquatic organisms are captive to continual life-cycle, multigenerational exposure. The possibility for continual but undetectable or unnoticed effects on aquatic organisms is particularly worrisome because effects could accumulate so slowly that major change goes undetected until the cumulative level of these effects finally cascades to irreversible change--change that would otherwise be attributed to natural adaptation or ecologic succession. As opposed to the conventional, persistent priority pollutants, PPCPs need not be persistent if they are continually introduced to surface waters, even at low parts-per-trillion/parts-per-billion concentrations (ng-microg/L). Even though some PPCPs are extremely persistent and introduced to the environment in very high quantities and perhaps have already gained ubiquity worldwide, others could act as if they were persistent, simply because their continual infusion into the aquatic environment serves to sustain perpetual life-cycle exposures for aquatic organisms. This review attempts to synthesize the literature on environmental origin, distribution/occurrence, and effects and to catalyze a more focused discussion in the environmental science community.

Agriculture1999National Institute of Environmental Health Sciences
Periodicals

Rank-Order Tournaments as Optimum Labor Contracts

This paper analyzes compensation schemes which pay according to an individual's ordinal rank in an organization rather than his output level. When workers are risk neutral, it is shown that wages based upon rank induce the same efficient allocation of resources as an incentive reward scheme based on individual output levels. Under some circumstances, risk-averse workers actually prefer to be paid on the basis of rank. In addition, if workers are heterogeneous in ability, low-quality workers attempt to contaminate high-quality firms, resulting in adverse selection. However, if ability is known in advance, a competitive handicapping structure exists which allows all workers to compete efficiently in the same organization.

Agriculture1981University of Chicago Press
Periodicals

Genome sequence of the palaeopolyploid soybean

Soybean (Glycine max) is one of the most important crop plants for seed protein and oil content, and for its capacity to fix atmospheric nitrogen through symbioses with soil-borne microorganisms. We sequenced the 1.1-gigabase genome by a whole-genome shotgun approach and integrated it with physical and high-density genetic maps to create a chromosome-scale draft sequence assembly. We predict 46,430 protein-coding genes, 70% more than Arabidopsis and similar to the poplar genome which, like soybean, is an ancient polyploid (palaeopolyploid). About 78% of the predicted genes occur in chromosome ends, which comprise less than one-half of the genome but account for nearly all of the genetic recombination. Genome duplications occurred at approximately 59 and 13 million years ago, resulting in a highly duplicated genome with nearly 75% of the genes present in multiple copies. The two duplication events were followed by gene diversification and loss, and numerous chromosome rearrangements. An accurate soybean genome sequence will facilitate the identification of the genetic basis of many soybean traits, and accelerate the creation of improved soybean varieties. Soybean (Glycine max) is an important commercial crop providing both protein and oil, and its symbiotic relationship to nitrogen-fixing bacteria makes it a profitable crop in rotation systems. Its genome has now been sequenced: it is the first legume and at 1.1 gigabases, the largest plant genome to be sequenced by whole-genome shotgun techniques. Soybean has a colourful genetic past; genome duplications occurred at 59 and 13 million years ago, resulting in a highly duplicated genome with nearly 75% of the genes present in multiple copies. An accurate soybean genome sequence should accelerate the creation of improved soybean varieties. Soybean is an important crop plant, providing seed protein and oil and fixing atmospheric nitrogen through symbioses with soil-borne microorganisms. Using a whole-genome shotgun approach, its 1.1-gigabase genome is now sequenced and integrated with physical and high-density genetic maps to create a chromosome-scale draft sequence assembly.

Agriculture2010Nature Portfolio